Adding custom file types in Pulsar IDE
Unrecognized file types are treated as plain text in Pulsar. I followed these steps to add a custom file type, so syntax highlighting etc. works.
Unrecognized file types are treated as plain text in Pulsar. I followed these steps to add a custom file type, so syntax highlighting etc. works.
I’m doing this on Linux Mint 20.2, but these steps would also work on Ubuntu 20.04 LTS or derivatives.
An overview of my current note-taking set up using QOwnNotes and Nextcloud. I also discuss programs I have used in the past like Zim, org-mode and Joplin.
A tutorial on using Pandoc to convert Markdown to HTML using a CSS stylesheet and a custom template.
This was my attempt at introducing Python to a general audience at Tech me out at home — an online event organised by Pint of Science, Ireland.
Summary of changes in BioVM 18.04.1 — a Linux virtual machine based on Ubuntu for teaching and learning Bioinformatics.
An online Python course for beginners in programming
A Python script to obtain the complete taxonomic lineage of an organism from NCBI taxonomy data.
A new release of BioVM with updated software, Galaxy configuration, documentation and includes recommendations for installing new software.
This is a step-by-step tutorial on running an instance of the Galaxy platform (v17.09) for biomedical research on Ubuntu 16.04 LTS.
How to run containers of VIGA, QIIME, PyFBA, Cutadapt and DADA2 and a helpful wrapper script for non-root users.
This is a VirtualBox VM I made for QIIME 1.9 based on the current version Ubuntu MATE LTS (16.04.3) with some additional improvements.
Updating BLAST databases can can be done using the update_blastdb command but this script only updates databases if they are not being used.
This post is about the free and open source software I used for creating an online course.